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| Section: Plant Lab Protocols |
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Cellulases (C1 and Cx)
(1,4-(1,3:1,4)-b-D-Glucan 4 glucanohydrolase EC 3.2.1.4)
Hydrolysis of crystalline cellulose is a complex process. A minimum of three different types of enzymes are believed to be involved
i) Endo-b,4 glucanase (Cx-cellulase).
ii) Exo-b,4 glucanase (C1-cellulase).
iii) b-glucosidase (cellobiase).
Initiation of Hydrolysis of native cellulose is effected by C1 enzyme. This enzyme is an exo-b-1,4 glucanase. Exo-glucanase splits alternate bonds from the non-reducing end of cellulose chain yielding cellobiose. The endo-glucanase is distinguished by the mechanism of their attack on carboxy methyl cellulose. It does not act on native cellulose. b-glucosidases play an important function in the degradation of cellulose by hydrolysing cellobiose which is an inhibitor of exo-glucanase. Only organisms producing C1-cellulose (exo-glucanase) are capable of hydrolysing native cellulose (filter paper, cotton etc.)
Content
i) Viscometric method
ii) Colorimetric method
iii) Combined assay
i) Assay of Cx- cellulase (Endo-b-1,4 glucanase) (viscometric method)
Principle
Endo-b-1,4 glucanase acts on carboxymethyl cellulose (CMC) and hydrolyses the b-1,4 glycosidic bonds in a random manner. As a result, the viscosity of CMC solution is reduced. This is measured in an Ostwald viscometer.
Materials
⇒ Citrate-phosphate Buffer 0.1M (pH 6.0)
⇒ Carboxymethyl Cellulose 0.5% Solution
Dissolve 0.5g sodium carboxymethyl cellulose in hot water. Adjust to pH 6.0.
⇒ Chloramphenicol-cyclohexamide Solution
Dissolve 25mg each of chloramphenicol and cyclohexamide in 20mL water.
⇒ Ostwald Viscometer
Procedure
1.
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Pipette out 3mL carboxymethyl cellulose solution and 1mL citrate-phosphate buffer into a test tube.
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2.
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Add 1mL of enzyme extract.
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3.
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Add 0.1mL chloramphenicol-cyclohexamide solution to prevent microbial contamination.
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4.
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Incubate at 37°C for 16h.
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5.
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After incubation, heat the solution in boiling water for 3min, cool and then centrifuge at 8000g for 20min.
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6.
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Run a control which contains denatured enzyme (heat the enzyme extract for 3min in boiling water).
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7.
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Draw 5mL portion of control and test supernatant solution and measure the viscosity in an Ostwald viscometer.
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Calculation
The percent loss of viscosity is interpreted as proportional to the cellulase activity. Calculate the percent reduction in viscosity as below:
V =
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T0 – T
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x 100
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T0 - TH2O
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where, V = percent loss in viscosity, To - flow time in seconds of zero time, T -flow time after incubation and TH2O — flow time of water.
References
1. Hinton, D M and Pressey, R (1974) J Food Sci 39 783.
ii) Cx b (l-4) glucanase assay (colorimetric)
Principle
The production of reducing sugar (glucose) due to cellulolytic activity is measured by dinitrosalicylic acid method.
Materials
⇒ Sodium Citrate Buffer 0.1M (pH 5.0)
⇒ Carboxymethyl Cellulose 1%
Dissolve 1g carboxymethyl cellulose in 100mL Sodium Citrate Buffer 0.1M (pH5.0)
⇒ Dinitrosalicylic Acid (DNS) Reagent (Refer carbohydrate section)
⇒ 40% Rochelle salt solution (Potassium sodium tartrate)
Procedure
1.
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Pipette out 0.45mL of 1% CMC solution at a temperature of 55°C and 0.05mL of enzyme extract.
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2.
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Incubate the mixture at 55°C for 15 min.
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3.
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Immediately after removing the enzyme substrate mixture from the bath add 0.5mL DNS reagent.
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4.
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Heat the mixture in a boiling water bath for 5 min.
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5.
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While the tubes are warm, add 1.0mL potassium sodium tartrate solution.
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6.
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Cool to room temperature.
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7.
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Add water to make 5mL volume.
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8.
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Measure the absorbance at 540nm.
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9.
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Prepare a standard graph with glucose in the concentration range 50mg to 1000mg/mL.
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Calculation
Express the enzyme activity as the mg glucose released per min per mg protein.
References
1. Denison, D A and Koehn, R D (1977) Mycologia LXIX 592.
iii) C1 and Cx Cellulase (Combined Assay)
Principle
The principle is same as that of Cx cellulase. The substrate used is filter paper instead of CMC
Reagents
⇒ Citrate-phosphate buffer 0.1M (pH 5.8)
⇒ Filter paper disc.
⇒ Cut the Whatman filter paper No.1 with a paper punch (7mm diameter) to ensure the same surface area of substrate in reaction tube.
Procedure
1.
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Add 0.5mL enzyme extract to 32mg of dry Whatman No.1 filter paper.
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2.
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Incubate the mixture for 1h at 50°C.
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3.
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Follow steps 3 - 9 in the Cx cellulase colorimetric assay.
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References
1. Denison, D A and Koehn, R D (1977) Mycologia LXIX 592.
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